BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B06LP1|AL426472
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1767 1659 0.0
>3x_Contig1767
Length = 23302
Score = 1659 bits (836), Expect = 0.0
Identities = 853/858 (99%), Gaps = 1/858 (0%)
Strand = Plus / Minus
Query: 1 cggtaagccaatgtaatcttgagatgatttcgttaagatatcactatttaaatgcatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 cggtaagccaatgtaatcttgagatgatttcgttaagatatcactatttaaatgcatatc 3197
Query: 61 taaacgtctctctgccgtgttaaatttaaatttaggcagtaataaaattcatactattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 taaacgtctctctgccgtgttaaatttaaatttaggcagtaataaaattcatactattcg 3137
Query: 121 gacaatatgagtacttttggttcgactttttatgattctgtagcaaagaactacatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 gacaatatgagtacttttggttcgactttttatgattctgtagcaaagaactacatatgt 3077
Query: 181 gaatgtggaagttgcaagataggaaaaaatgtagaattttacatggttcgtttcttcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3076 gaatgtggaagttgcaagataggaaaaaatgtagaattttacatggttcgtttcttcatc 3017
Query: 241 atgggttttgttttacccgtgctatggatccttaacttaatgttgtacctttatgccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3016 atgggttttgttttacccgtgctatggatccttaacttaatgttgtacctttatgccaac 2957
Query: 301 tggataatcgaccacaatgttagggtcccggaacttgactctgaaaccttatataccgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2956 tggataatcgaccacaatgttagggtcccggaacttgactctgaaaccttatataccgaa 2897
Query: 361 tatgaatgccaacaatggaaacagcgcagtgtcacatcactaaacaaaagtattaccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 tatgaatgccaacaatggaaacagcgcagtgtcacatcactaaacaaaagtattaccaag 2837
Query: 421 gacttctacgctattaacaacccattgacattttccatgcttactttaaaactaccagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2836 gacttctacgctattaacaacccattgacattttccatgcttactttaaaactaccagat 2777
Query: 481 cccgtaccattgactacgtatcaacatctctctttgcctgatccaacgaagggcagtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2776 cccgtaccattgactacgtatcaacatctctctttgcctgatccaacgaagggcagtgat 2717
Query: 541 gaaaaaaaccagttttcggaaagcgctactaccctggacgagggtgcaacagactcctca 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2716 gaaaaaaaccagttttcggaaagcgctactaccctggacgagggtgc-acagactcctca 2658
Query: 601 tcatttgagacggaagacggtggtaccaaatccatagtgacagctcagtgtctaaaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 tcatttgagacggaagacggtggtaccaaatccatagtgacagctcagtgtctaaaagaa 2598
Query: 661 atcgcttctgaactaatgaaaaatcatgacgttaatgcaagaactatcaggaactggttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 atcgcttctgaactaatgaaaaatcatgacgttaatgcaagaactatcaggaactggttt 2538
Query: 721 ctgcgtasttactgtgcaatgacagggtacacaatatccattataatgatagtagttatc 780
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 ctgcgtagcttatgtgcaatgacagggtacacaatatccattataatgatagtagttatc 2478
Query: 781 gttaagactaacagccaaccggcatcgtaccgagaatgaacatatgcattactcgtccgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 gttaagactaacagccaaccggcatcgtaccgagaatgaacatatgcattactcgtccgc 2418
Query: 841 attatacaaaagaaaaaa 858
||||||||||||||||||
Sbjct: 2417 attatacaaaagaaaaaa 2400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6056
Number of Sequences: 1807
Number of extensions: 6056
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)